Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Peptostreptococcales
Family
Peptostreptococcaceae
Genus
Clostridioides
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Peptostreptococcales |
| Family | Peptostreptococcaceae |
| Genus | Clostridioides |
| Species | Clostridioides difficile |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 1 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Chains - Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Chemoorganotroph |
| Pathogenicity | Human |
Genome Summary
Clostridioides difficile str. RA09_70
Accession NumberJPPA00000000.1
Gene Summary
Adenine Count
1519866 bp
Thymine Count
1506247 bp
Guanine Count
608909 bp
Cytosine Count
597184 bp
Genome Length
4232226 bp
Protein-coding Genes
3643 genes
Non-Coding Genes
111 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | IM33_08815 | Not Available | - | 1791109 - 1792353 | 48461.1 |
| endonuclease | IM33_08820 | Q8XKF6 | + | 1792646 - 1792957 | 12140.0 |
| phosphomethylpyrimidine kinase | IM33_08825 | P56904 | + | 1793243 - 1794037 | 28962.3 |
| hydroxyethylthiazole kinase | IM33_08830 | Q186F4 | + | 1794062 - 1794853 | 28479.5 |
| thiamine-phosphate pyrophosphorylase | IM33_08835 | Q186F8 | + | 1794875 - 1795507 | 23359.5 |
| pts mannose transporter subunit iib | IM33_08840 | P46318 | + | 1795646 - 1795948 | 10974.8 |
| abc transporter permease | IM33_08845 | Not Available | - | 1796110 - 1796865 | 28043.9 |
| abc transporter atp-binding protein | IM33_08850 | P32010 | - | 1796853 - 1797815 | 36356.1 |
| transcriptional regulator | IM33_08855 | Not Available | - | 1797819 - 1798277 | 17484.3 |
| gntr family transcriptional regulator | IM33_08860 | P54590 | + | 1798629 - 1798985 | 13756.8 |
Pathways
1 pathway
No pathways found
No metabolic pathways have been associated with this bacterium yet.