Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Peptostreptococcales
Family
Peptostreptococcaceae
Genus
Clostridioides
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Peptostreptococcales |
| Family | Peptostreptococcaceae |
| Genus | Clostridioides |
| Species | Clostridioides difficile |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 1 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Chains - Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Chemoorganotroph |
| Pathogenicity | Human |
Genome Summary
Clostridioides difficile str. RA09_70
Accession NumberJPPA00000000.1
Gene Summary
Adenine Count
1519866 bp
Thymine Count
1506247 bp
Guanine Count
608909 bp
Cytosine Count
597184 bp
Genome Length
4232226 bp
Protein-coding Genes
3643 genes
Non-Coding Genes
111 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| ribose abc transporter permease | IM33_08760 | P44736 | + | 1779979 - 1780929 | 33095.7 |
| sugar abc transporter substrate-binding protein | IM33_08765 | Q8G848 | + | 1780952 - 1781914 | 34153.0 |
| membrane protein | IM33_08770 | P42978 | + | 1782285 - 1782917 | 22671.2 |
| potassium abc transporter atpase | IM33_08780 | O32327 | + | 1783465 - 1785141 | 60332.5 |
| potassium-transporting atpase subunit b | IM33_08785 | O32328 | + | 1785166 - 1787223 | 73346.7 |
| potassium-transporting atpase subunit c | IM33_08790 | Q186E8 | + | 1787242 - 1787868 | 22227.8 |
| cysteine synthase | IM33_08795 | P37887 | + | 1788105 - 1789013 | 32685.6 |
| serine acetyltransferase | IM33_08800 | Q65PC9 | + | 1789040 - 1789630 | 21437.5 |
| ferredoxin | IM33_08805 | P00203 | + | 1789802 - 1789990 | 6578.56 |
| methionine aminopeptidase | IM33_08810 | P53579 | - | 1790044 - 1790913 | 32200.6 |
Pathways
1 pathway
No pathways found
No metabolic pathways have been associated with this bacterium yet.