Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Peptostreptococcales
Family
Peptostreptococcaceae
Genus
Clostridioides
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Peptostreptococcales |
| Family | Peptostreptococcaceae |
| Genus | Clostridioides |
| Species | Clostridioides difficile |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 1 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Chains - Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Chemoorganotroph |
| Pathogenicity | Human |
Genome Summary
Clostridioides difficile str. RA09_70
Accession NumberJPPA00000000.1
Gene Summary
Adenine Count
1519866 bp
Thymine Count
1506247 bp
Guanine Count
608909 bp
Cytosine Count
597184 bp
Genome Length
4232226 bp
Protein-coding Genes
3643 genes
Non-Coding Genes
111 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| histidine kinase | IM33_08710 | Q52969 | + | 1767531 - 1769387 | 71960.5 |
| homoserine dehydrogenase | IM33_08715 | Not Available | + | 1770094 - 1771311 | 44946.1 |
| hypothetical protein | IM33_08720 | Not Available | + | 1771428 - 1771922 | 19472.0 |
| histidinol dehydrogenase | IM33_08725 | Q5WIU9 | + | 1772164 - 1773429 | 46815.2 |
| alpha/beta hydrolase | IM33_08730 | Not Available | - | 1773627 - 1774379 | 28574.0 |
| histidine kinase | IM33_08735 | O07917 | - | 1774497 - 1774766 | 10522.8 |
| rok family transcriptional regulator | IM33_08740 | Not Available | + | 1775224 - 1776318 | 41189.1 |
| n-acetylglucosamine kinase | IM33_08745 | Not Available | + | 1776320 - 1777270 | 34964.3 |
| hypothetical protein | IM33_08750 | Not Available | + | 1777263 - 1778447 | 46332.0 |
| sugar abc transporter atp-binding protein | IM33_08755 | Q8RBQ1 | + | 1778460 - 1779956 | 55896.2 |
Pathways
1 pathway
No pathways found
No metabolic pathways have been associated with this bacterium yet.