Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Peptostreptococcales
Family
Peptostreptococcaceae
Genus
Clostridioides
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Peptostreptococcales |
| Family | Peptostreptococcaceae |
| Genus | Clostridioides |
| Species | Clostridioides difficile |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 1 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Chains - Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Chemoorganotroph |
| Pathogenicity | Human |
Genome Summary
Clostridioides difficile str. RA09_70
Accession NumberJPPA00000000.1
Gene Summary
Adenine Count
1519866 bp
Thymine Count
1506247 bp
Guanine Count
608909 bp
Cytosine Count
597184 bp
Genome Length
4232226 bp
Protein-coding Genes
3643 genes
Non-Coding Genes
111 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| imidazole glycerol phosphate synthase | IM33_08460 | Q8R883 | + | 1726919 - 1727524 | 22663.4 |
| 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase | IM33_08465 | Q18C71 | + | 1727521 - 1728243 | 26641.3 |
| imidazole glycerol phosphate synthase | IM33_08470 | Q18C74 | + | 1728225 - 1728983 | 27605.2 |
| phosphoribosyl-atp pyrophosphatase | IM33_08475 | Q8R886 | + | 1729012 - 1729680 | 25708.9 |
| amino acid permease | IM33_08480 | Not Available | + | 1730481 - 1731809 | 45965.2 |
| polysaccharide deacetylase | IM33_08485 | Not Available | + | 1732577 - 1733410 | 31518.5 |
| peptidylprolyl isomerase | IM33_08490 | Q81U45 | + | 1733478 - 1734434 | 36495.4 |
| rna polymerase sigma70 | IM33_08495 | O05404 | + | 1734486 - 1734968 | 19329.3 |
| hypothetical protein | IM33_08500 | Not Available | + | 1734980 - 1735849 | 33997.2 |
| anti-sigma-v factor rsiv | IM33_08505 | O05403 | + | 1735892 - 1736647 | 29335.1 |
Pathways
1 pathway
No pathways found
No metabolic pathways have been associated with this bacterium yet.