Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Peptostreptococcales
Family
Peptostreptococcaceae
Genus
Clostridioides
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Peptostreptococcales |
| Family | Peptostreptococcaceae |
| Genus | Clostridioides |
| Species | Clostridioides difficile |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 1 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Chains - Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Chemoorganotroph |
| Pathogenicity | Human |
Genome Summary
Clostridioides difficile str. RA09_70
Accession NumberJPPA00000000.1
Gene Summary
Adenine Count
1519866 bp
Thymine Count
1506247 bp
Guanine Count
608909 bp
Cytosine Count
597184 bp
Genome Length
4232226 bp
Protein-coding Genes
3643 genes
Non-Coding Genes
111 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| amino acid racemase | IM33_08405 | P45550 | + | 1717627 - 1718796 | 44737.5 |
| mutase | IM33_08410 | P45549 | + | 1718799 - 1719992 | 43939.9 |
| fmn-dependent nadh-azoreductase | IM33_08415 | B2TRR9 | + | 1720342 - 1720995 | 25050.0 |
| hypothetical protein | IM33_08420 | Not Available | + | 1721071 - 1721280 | 8118.67 |
| hypothetical protein | IM33_08425 | Not Available | - | 1721420 - 1721983 | 21660.2 |
| hemolysin | IM33_08430 | O51144 | + | 1722147 - 1722800 | 24723.1 |
| atp phosphoribosyltransferase | IM33_08440 | A5N7Q4 | + | 1723662 - 1724606 | 37042.8 |
| hypothetical protein | IM33_08445 | Q18C67 | + | 1724628 - 1725254 | 23456.3 |
| histidinol-phosphate aminotransferase | IM33_08450 | A0PXP5 | + | 1725287 - 1726336 | 39818.9 |
| imidazoleglycerol-phosphate dehydratase | IM33_08455 | Q18C69 | + | 1726339 - 1726917 | 21660.0 |
Pathways
1 pathway
No pathways found
No metabolic pathways have been associated with this bacterium yet.