Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Peptostreptococcales
Family
Peptostreptococcaceae
Genus
Clostridioides
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Peptostreptococcales |
| Family | Peptostreptococcaceae |
| Genus | Clostridioides |
| Species | Clostridioides difficile |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 1 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Chains - Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Chemoorganotroph |
| Pathogenicity | Human |
Genome Summary
Clostridioides difficile str. RA09_70
Accession NumberJPPA00000000.1
Gene Summary
Adenine Count
1519866 bp
Thymine Count
1506247 bp
Guanine Count
608909 bp
Cytosine Count
597184 bp
Genome Length
4232226 bp
Protein-coding Genes
3643 genes
Non-Coding Genes
111 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| abc transporter permease | IM33_08295 | Not Available | - | 1691247 - 1692476 | 45361.9 |
| histidine kinase | IM33_08300 | Not Available | - | 1692591 - 1693595 | 39609.5 |
| transcriptional regulator | IM33_08305 | Q9K621 | - | 1693619 - 1694293 | 26068.5 |
| bacitracin abc transporter atp-binding protein | IM33_08310 | Not Available | + | 1694582 - 1695349 | 28388.4 |
| abc transporter permease | IM33_08315 | Q9K618 | + | 1695336 - 1697273 | 75392.8 |
| sulfotransferase | IM33_08320 | O05218 | + | 1697489 - 1699102 | 60086.7 |
| 3-mercaptopyruvate sulfurtransferase | IM33_08325 | Not Available | - | 1699234 - 1700085 | 31906.0 |
| nad-binding oxidoreductase | IM33_08330 | P25981 | + | 1700714 - 1701607 | 32979.9 |
| dihydropyrimidine dehydrogenase | IM33_08335 | Q8U195 | + | 1701607 - 1703001 | 49612.6 |
| diguanylate phosphodiesterase | IM33_08345 | Not Available | + | 1703248 - 1705467 | 86445.2 |
Pathways
1 pathway
No pathways found
No metabolic pathways have been associated with this bacterium yet.