Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Peptostreptococcales
Family
Peptostreptococcaceae
Genus
Clostridioides
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Peptostreptococcales |
| Family | Peptostreptococcaceae |
| Genus | Clostridioides |
| Species | Clostridioides difficile |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 1 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Chains - Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Chemoorganotroph |
| Pathogenicity | Human |
Genome Summary
Clostridioides difficile str. RA09_70
Accession NumberJPPA00000000.1
Gene Summary
Adenine Count
1519866 bp
Thymine Count
1506247 bp
Guanine Count
608909 bp
Cytosine Count
597184 bp
Genome Length
4232226 bp
Protein-coding Genes
3643 genes
Non-Coding Genes
111 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| gnat family acetyltransferase | IM33_08235 | Not Available | - | 1679442 - 1679882 | 17025.4 |
| membrane protein | IM33_08240 | Not Available | + | 1680056 - 1681024 | 36755.1 |
| tyrosyl-trna synthetase | IM33_08245 | Q97KY6 | + | 1681501 - 1682709 | 45660.6 |
| polysaccharide deacetylase | IM33_08250 | Q8DP63 | - | 1682764 - 1683645 | 33726.5 |
| membrane protein | IM33_08255 | Not Available | + | 1684032 - 1684976 | 34456.5 |
| reverse rubrerythrin-1 | IM33_08260 | Q97D82 | + | 1685199 - 1685744 | 19990.9 |
| iron-sulfur protein | IM33_08265 | P73695 | + | 1685836 - 1686984 | 42655.6 |
| dihydroorotase | IM33_08270 | Q18C47 | + | 1687037 - 1688302 | 46017.0 |
| abc transporter permease | IM33_08285 | O31712 | - | 1689330 - 1690562 | 44965.2 |
| peptide abc transporter atp-binding protein | IM33_08290 | Not Available | - | 1690565 - 1691239 | 25451.9 |
Pathways
1 pathway
No pathways found
No metabolic pathways have been associated with this bacterium yet.