Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Peptostreptococcales
Family
Peptostreptococcaceae
Genus
Clostridioides
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Peptostreptococcales |
| Family | Peptostreptococcaceae |
| Genus | Clostridioides |
| Species | Clostridioides difficile |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 1 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Chains - Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Chemoorganotroph |
| Pathogenicity | Human |
Genome Summary
Clostridioides difficile str. RA09_70
Accession NumberJPPA00000000.1
Gene Summary
Adenine Count
1519866 bp
Thymine Count
1506247 bp
Guanine Count
608909 bp
Cytosine Count
597184 bp
Genome Length
4232226 bp
Protein-coding Genes
3643 genes
Non-Coding Genes
111 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| pantoate--beta-alanine ligase | IM33_08185 | Q18C33 | - | 1668055 - 1668903 | 31646.3 |
| 3-methyl-2-oxobutanoate hydroxymethyltransferase | IM33_08190 | Q18C32 | - | 1668922 - 1669749 | 29755.1 |
| 6-phosphogluconate dehydrogenase | IM33_08195 | Not Available | - | 1669724 - 1670647 | 34593.7 |
| diguanylate phosphodiesterase | IM33_08200 | P77334 | + | 1671117 - 1673210 | 81462.2 |
| hypothetical protein | IM33_08205 | Not Available | - | 1673453 - 1673770 | 12489.7 |
| caax protease | IM33_08210 | Not Available | - | 1673798 - 1674784 | 38207.7 |
| hypothetical protein | IM33_08215 | Not Available | + | 1675252 - 1675539 | 11479.3 |
| merr family transcriptional regulator | IM33_08220 | P39842 | + | 1675783 - 1676601 | 32442.9 |
| iron transporter feob | IM33_08225 | Q7MVL1 | - | 1676743 - 1678863 | 78186.5 |
| iron transporter feoa | IM33_08230 | Not Available | - | 1678889 - 1679116 | 8334.37 |
Pathways
1 pathway
No pathways found
No metabolic pathways have been associated with this bacterium yet.