Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Peptostreptococcales
Family
Peptostreptococcaceae
Genus
Clostridioides
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Peptostreptococcales |
| Family | Peptostreptococcaceae |
| Genus | Clostridioides |
| Species | Clostridioides difficile |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 1 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Chains - Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Chemoorganotroph |
| Pathogenicity | Human |
Genome Summary
Clostridioides difficile str. RA09_70
Accession NumberJPPA00000000.1
Gene Summary
Adenine Count
1519866 bp
Thymine Count
1506247 bp
Guanine Count
608909 bp
Cytosine Count
597184 bp
Genome Length
4232226 bp
Protein-coding Genes
3643 genes
Non-Coding Genes
111 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| 3-methyladenine dna glycosylase | IM33_08070 | Q18C13 | + | 1647152 - 1647760 | 23540.3 |
| dna-binding protein | IM33_08075 | Not Available | + | 1648742 - 1649332 | 22511.1 |
| pyrroline-5-carboxylate reductase | IM33_08080 | Not Available | + | 1649359 - 1650162 | 28486.6 |
| signal peptide protein | IM33_08085 | P31847 | - | 1650243 - 1651418 | 42026.6 |
| hypothetical protein | IM33_08090 | Not Available | + | 1651682 - 1652155 | 18171.2 |
| rna polymerase sigma factor rpod | IM33_08095 | P52328 | + | 1652448 - 1653332 | 34291.3 |
| hypothetical protein | IM33_08105 | Not Available | + | 1654719 - 1655483 | 30120.1 |
| hypothetical protein | IM33_08110 | Not Available | + | 1655508 - 1655753 | 9733.42 |
| integral membrane protein mvin | IM33_08115 | Q8K9L3 | + | 1655782 - 1657326 | 56408.3 |
| deoxyribose-phosphate aldolase | IM33_08120 | Q18C22 | + | 1657353 - 1658012 | 24004.2 |
Pathways
1 pathway
No pathways found
No metabolic pathways have been associated with this bacterium yet.