Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Peptostreptococcales
Family
Peptostreptococcaceae
Genus
Clostridioides
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Peptostreptococcales |
| Family | Peptostreptococcaceae |
| Genus | Clostridioides |
| Species | Clostridioides difficile |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 1 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Chains - Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Chemoorganotroph |
| Pathogenicity | Human |
Genome Summary
Clostridioides difficile str. RA09_70
Accession NumberJPPA00000000.1
Gene Summary
Adenine Count
1519866 bp
Thymine Count
1506247 bp
Guanine Count
608909 bp
Cytosine Count
597184 bp
Genome Length
4232226 bp
Protein-coding Genes
3643 genes
Non-Coding Genes
111 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| abc transporter atp-binding protein | IM33_08020 | Not Available | + | 1636212 - 1636943 | 28075.2 |
| abc transporter substrate-binding protein | IM33_08025 | Not Available | + | 1636944 - 1637936 | 36284.0 |
| hypothetical protein | IM33_08030 | Not Available | - | 1638034 - 1638630 | 23237.7 |
| lipoprotein | IM33_08035 | Not Available | + | 1638876 - 1639475 | 22594.6 |
| hypothetical protein | IM33_08040 | Not Available | - | 1639644 - 1640111 | 18018.8 |
| transcriptional regulator | IM33_08045 | Not Available | + | 1640221 - 1641165 | 36125.1 |
| abc transporter atp-binding protein | IM33_08050 | Q18C09 | + | 1641713 - 1642678 | 36014.1 |
| methionine abc transporter permease | IM33_08055 | Not Available | + | 1642671 - 1643327 | 23175.6 |
| hypothetical protein | IM33_08060 | Q8Z992 | + | 1643364 - 1644155 | 28925.9 |
| histidine kinase | IM33_08065 | Not Available | + | 1644303 - 1647041 | 106470.0 |
Pathways
1 pathway
No pathways found
No metabolic pathways have been associated with this bacterium yet.