Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Peptostreptococcales
Family
Peptostreptococcaceae
Genus
Clostridioides
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Peptostreptococcales |
| Family | Peptostreptococcaceae |
| Genus | Clostridioides |
| Species | Clostridioides difficile |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 1 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Chains - Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Chemoorganotroph |
| Pathogenicity | Human |
Genome Summary
Clostridioides difficile str. RA09_70
Accession NumberJPPA00000000.1
Gene Summary
Adenine Count
1519866 bp
Thymine Count
1506247 bp
Guanine Count
608909 bp
Cytosine Count
597184 bp
Genome Length
4232226 bp
Protein-coding Genes
3643 genes
Non-Coding Genes
111 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | IM33_07915 | Not Available | + | 1607909 - 1608355 | 17865.9 |
| transcriptional regulator | IM33_07920 | P39663 | + | 1608623 - 1609327 | 26880.7 |
| histidine kinase | IM33_07925 | Not Available | + | 1609314 - 1610564 | 47931.8 |
| peptide abc transporter atp-binding protein | IM33_07930 | O34697 | + | 1610644 - 1611321 | 25310.7 |
| abc transporter permease | IM33_07935 | Not Available | + | 1611322 - 1613883 | 96052.6 |
| (fe-s)-binding protein | IM33_07940 | Not Available | + | 1614099 - 1615373 | 48145.9 |
| penicillin-binding protein | IM33_07945 | Q6G6M9 | - | 1615535 - 1618576 | 111817.0 |
| phage-shock protein | IM33_07950 | Not Available | + | 1618783 - 1619082 | 11797.2 |
| membrane protein | IM33_07955 | P49022 | - | 1619332 - 1621560 | 81306.0 |
| abc transporter atp-binding protein | IM33_07960 | Not Available | + | 1621842 - 1623614 | 67119.6 |
Pathways
1 pathway
No pathways found
No metabolic pathways have been associated with this bacterium yet.