Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Peptostreptococcales
Family
Peptostreptococcaceae
Genus
Clostridioides
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Peptostreptococcales |
| Family | Peptostreptococcaceae |
| Genus | Clostridioides |
| Species | Clostridioides difficile |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 1 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Chains - Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Chemoorganotroph |
| Pathogenicity | Human |
Genome Summary
Clostridioides difficile str. RA09_70
Accession NumberJPPA00000000.1
Gene Summary
Adenine Count
1519866 bp
Thymine Count
1506247 bp
Guanine Count
608909 bp
Cytosine Count
597184 bp
Genome Length
4232226 bp
Protein-coding Genes
3643 genes
Non-Coding Genes
111 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| chitinase | IM33_07760 | Q8R844 | - | 1577888 - 1580017 | 80940.1 |
| hypothetical protein | IM33_07765 | Not Available | + | 1580249 - 1580530 | 10590.7 |
| ubid family decarboxylase | IM33_07770 | Not Available | + | 1580696 - 1582087 | 54156.2 |
| hydrolase | IM33_07775 | Not Available | + | 1582211 - 1583680 | 54360.8 |
| fis family transcriptional regulator | IM33_07780 | Not Available | + | 1583745 - 1584338 | 22120.8 |
| multiprotein complex assembly protein | IM33_07785 | Not Available | + | 1584475 - 1585866 | 54396.8 |
| transporter | IM33_07790 | A7ZA61 | + | 1586047 - 1586418 | 13747.8 |
| membrane protein | IM33_07795 | Q5HLG0 | + | 1586411 - 1587100 | 24290.6 |
| membrane protein | IM33_07800 | Not Available | + | 1587624 - 1588490 | 31577.4 |
| hypothetical protein | IM33_07805 | Not Available | + | 1588732 - 1589541 | 31252.0 |
Pathways
1 pathway
No pathways found
No metabolic pathways have been associated with this bacterium yet.