Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Peptostreptococcales
Family
Peptostreptococcaceae
Genus
Clostridioides
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Peptostreptococcales |
| Family | Peptostreptococcaceae |
| Genus | Clostridioides |
| Species | Clostridioides difficile |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 1 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Chains - Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Chemoorganotroph |
| Pathogenicity | Human |
Genome Summary
Clostridioides difficile str. RA09_70
Accession NumberJPPA00000000.1
Gene Summary
Adenine Count
1519866 bp
Thymine Count
1506247 bp
Guanine Count
608909 bp
Cytosine Count
597184 bp
Genome Length
4232226 bp
Protein-coding Genes
3643 genes
Non-Coding Genes
111 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | IM33_07700 | Not Available | + | 1566738 - 1567304 | 21761.2 |
| methyltransferase | IM33_07705 | Not Available | - | 1568207 - 1568881 | 24461.2 |
| isochorismatase | IM33_07710 | P96654 | - | 1569103 - 1569657 | 20964.1 |
| transcriptional regulator | IM33_07715 | Not Available | - | 1569736 - 1570101 | 14305.6 |
| merr family transcriptional regulator | IM33_07725 | Not Available | + | 1570697 - 1570835 | 5670.73 |
| acyl-coa acyltransferase | IM33_07730 | Not Available | + | 1570944 - 1571729 | 30409.4 |
| delta-lactam-biosynthetic de-n-acetylase | IM33_07735 | Q04729 | - | 1571826 - 1572650 | 31906.0 |
| exonuclease | IM33_07740 | Q6G9A7 | + | 1572873 - 1575992 | 122001.0 |
| rnase h | IM33_07745 | Q04740 | + | 1576010 - 1576609 | 22737.0 |
| elongation factor tu | IM33_07750 | Q18CE4 | + | 1576870 - 1577631 | 28109.6 |
Pathways
1 pathway
No pathways found
No metabolic pathways have been associated with this bacterium yet.