Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Peptostreptococcales
Family
Peptostreptococcaceae
Genus
Clostridioides
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Peptostreptococcales |
| Family | Peptostreptococcaceae |
| Genus | Clostridioides |
| Species | Clostridioides difficile |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 1 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Chains - Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Chemoorganotroph |
| Pathogenicity | Human |
Genome Summary
Clostridioides difficile str. RA09_70
Accession NumberJPPA00000000.1
Gene Summary
Adenine Count
1519866 bp
Thymine Count
1506247 bp
Guanine Count
608909 bp
Cytosine Count
597184 bp
Genome Length
4232226 bp
Protein-coding Genes
3643 genes
Non-Coding Genes
111 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| membrane protein | IM33_07645 | Not Available | + | 1552809 - 1553753 | 34182.2 |
| hypothetical protein | IM33_07650 | O35008 | - | 1554047 - 1554982 | 35743.3 |
| membrane protein | IM33_07655 | Not Available | - | 1555102 - 1555695 | 22882.8 |
| membrane protein | IM33_07660 | Not Available | + | 1555803 - 1556231 | 15172.2 |
| atp-binding protein | IM33_07665 | Q5M9F5 | + | 1556321 - 1556971 | 24300.3 |
| multidrug transporter mate | IM33_07670 | Not Available | - | 1557088 - 1558443 | 49586.4 |
| integrase | IM33_07675 | Q8R890 | - | 1558685 - 1559215 | 20507.3 |
| hypothetical protein | IM33_07680 | Not Available | - | 1562701 - 1562895 | 7192.52 |
| diguanylate cyclase | IM33_07685 | P0AAP2 | - | 1562864 - 1564609 | 67012.1 |
| merr family transcriptional regulator | IM33_07690 | P96690 | + | 1565247 - 1566056 | 31911.2 |
Pathways
1 pathway
No pathways found
No metabolic pathways have been associated with this bacterium yet.