Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Peptostreptococcales
Family
Peptostreptococcaceae
Genus
Clostridioides
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Peptostreptococcales |
| Family | Peptostreptococcaceae |
| Genus | Clostridioides |
| Species | Clostridioides difficile |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 1 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Chains - Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Chemoorganotroph |
| Pathogenicity | Human |
Genome Summary
Clostridioides difficile str. RA09_70
Accession NumberJPPA00000000.1
Gene Summary
Adenine Count
1519866 bp
Thymine Count
1506247 bp
Guanine Count
608909 bp
Cytosine Count
597184 bp
Genome Length
4232226 bp
Protein-coding Genes
3643 genes
Non-Coding Genes
111 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| oxidoreductase | IM33_07545 | Not Available | + | 1528734 - 1530020 | 49098.8 |
| hypothetical protein | IM33_07550 | Not Available | + | 1530227 - 1530592 | 13818.5 |
| amino acid amidase | IM33_07555 | Not Available | - | 1530559 - 1531353 | 29869.9 |
| methyltransferase | IM33_07560 | O29816 | - | 1531989 - 1532465 | 18131.6 |
| peptidase m20 | IM33_07565 | Not Available | - | 1532568 - 1533737 | 43567.6 |
| muramoyltetrapeptide carboxypeptidase | IM33_07570 | O34851 | + | 1533910 - 1534773 | 32597.7 |
| hypothetical protein | IM33_07575 | Not Available | + | 1534844 - 1535437 | 23273.8 |
| isochorismatase | IM33_07580 | Q8S8F9 | - | 1535698 - 1536333 | 23988.9 |
| glycerophosphodiester phosphodiesterase | IM33_07585 | P54527 | - | 1536413 - 1537144 | 27880.8 |
| peptide synthetase | IM33_07590 | O68006 | + | 1537479 - 1539668 | 84746.7 |
Pathways
1 pathway
No pathways found
No metabolic pathways have been associated with this bacterium yet.