Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Peptostreptococcales
Family
Peptostreptococcaceae
Genus
Clostridioides
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Peptostreptococcales |
| Family | Peptostreptococcaceae |
| Genus | Clostridioides |
| Species | Clostridioides difficile |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 1 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Chains - Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Chemoorganotroph |
| Pathogenicity | Human |
Genome Summary
Clostridioides difficile str. RA09_70
Accession NumberJPPA00000000.1
Gene Summary
Adenine Count
1519866 bp
Thymine Count
1506247 bp
Guanine Count
608909 bp
Cytosine Count
597184 bp
Genome Length
4232226 bp
Protein-coding Genes
3643 genes
Non-Coding Genes
111 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| 4-hydroxy-2-oxovalerate aldolase | IM33_00440 | Q764S0 | + | 79665 - 80666 | 36192.1 |
| hypothetical protein | IM33_00445 | Not Available | + | 80683 - 82038 | 47915.6 |
| hypothetical protein | IM33_00450 | Not Available | + | 82185 - 83078 | 35342.9 |
| nucleotidase | IM33_00455 | Not Available | + | 83324 - 84754 | 54179.5 |
| integrase | IM33_00460 | Not Available | - | 84957 - 85103 | 5564.78 |
| hypothetical protein | IM33_00475 | Not Available | - | 86644 - 87027 | 14729.6 |
| hypothetical protein | IM33_00480 | Not Available | + | 87204 - 87398 | 7585.24 |
| hypothetical protein | IM33_00490 | Not Available | - | 87616 - 87795 | 7267.75 |
| oxidoreductase | IM33_00500 | P44193 | + | 88089 - 88868 | 29865.1 |
| dna-binding protein | IM33_00510 | Not Available | - | 89073 - 89240 | 6443.84 |
Pathways
1 pathway
No pathways found
No metabolic pathways have been associated with this bacterium yet.