Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Peptostreptococcales
Family
Peptostreptococcaceae
Genus
Clostridioides
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Peptostreptococcales |
| Family | Peptostreptococcaceae |
| Genus | Clostridioides |
| Species | Clostridioides difficile |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 1 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Chains - Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Chemoorganotroph |
| Pathogenicity | Human |
Genome Summary
Clostridioides difficile str. RA09_70
Accession NumberJPPA00000000.1
Gene Summary
Adenine Count
1519866 bp
Thymine Count
1506247 bp
Guanine Count
608909 bp
Cytosine Count
597184 bp
Genome Length
4232226 bp
Protein-coding Genes
3643 genes
Non-Coding Genes
111 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| lamb/ycsf family protein | IM33_07495 | Q18BQ3 | + | 1517639 - 1518430 | 29107.0 |
| membrane protein | IM33_07500 | P42964 | + | 1518459 - 1519679 | 42814.9 |
| allophanate hydrolase | IM33_07505 | P60495 | + | 1519699 - 1520385 | 25804.3 |
| kipi antagonist | IM33_07510 | Q7WY77 | + | 1520423 - 1521409 | 36167.4 |
| merr family transcriptional regulator | IM33_07515 | Not Available | - | 1521626 - 1522192 | 21448.1 |
| chloromuconate cycloisomerase | IM33_07520 | Q834W6 | + | 1522571 - 1523638 | 38757.6 |
| beta-carotene 15,15'-monooxygenase | IM33_07525 | Not Available | + | 1523657 - 1524817 | 41682.3 |
| esterase | IM33_07530 | Q9L9D7 | + | 1524830 - 1526926 | 80747.9 |
| endoribonuclease | IM33_07535 | Not Available | - | 1526991 - 1527335 | 12914.5 |
| membrane protein | IM33_07540 | Not Available | + | 1527633 - 1528523 | 33087.8 |
Pathways
1 pathway
No pathways found
No metabolic pathways have been associated with this bacterium yet.