Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Peptostreptococcales
Family
Peptostreptococcaceae
Genus
Clostridioides
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Peptostreptococcales |
| Family | Peptostreptococcaceae |
| Genus | Clostridioides |
| Species | Clostridioides difficile |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 1 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Chains - Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Chemoorganotroph |
| Pathogenicity | Human |
Genome Summary
Clostridioides difficile str. RA09_70
Accession NumberJPPA00000000.1
Gene Summary
Adenine Count
1519866 bp
Thymine Count
1506247 bp
Guanine Count
608909 bp
Cytosine Count
597184 bp
Genome Length
4232226 bp
Protein-coding Genes
3643 genes
Non-Coding Genes
111 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| lantibiotic abc transporter atp-binding protein | IM33_07300 | Not Available | + | 1480472 - 1481179 | 26038.9 |
| lantibiotic abc transporter permease | IM33_07305 | Not Available | + | 1481181 - 1481897 | 26822.3 |
| lantibiotic abc transporter permease | IM33_07310 | Not Available | + | 1481899 - 1482657 | 28472.8 |
| histidine kinase | IM33_07315 | P33113 | + | 1482804 - 1484192 | 53174.8 |
| pyridoxine kinase | IM33_07320 | Not Available | - | 1484269 - 1485090 | 30489.2 |
| hypothetical protein | IM33_07325 | Not Available | + | 1485341 - 1486495 | 44693.1 |
| cold-shock protein | IM33_07330 | Q4L6A7 | + | 1486678 - 1486878 | 7124.35 |
| membrane protein | IM33_07335 | Not Available | + | 1487301 - 1487729 | 16418.7 |
| peptidylprolyl isomerase | IM33_07340 | Q8R760 | - | 1487882 - 1488637 | 28523.8 |
| membrane protein | IM33_07345 | Not Available | - | 1488759 - 1489175 | 16638.0 |
Pathways
1 pathway
No pathways found
No metabolic pathways have been associated with this bacterium yet.