Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Peptostreptococcales
Family
Peptostreptococcaceae
Genus
Clostridioides
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Peptostreptococcales |
| Family | Peptostreptococcaceae |
| Genus | Clostridioides |
| Species | Clostridioides difficile |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 1 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Chains - Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Chemoorganotroph |
| Pathogenicity | Human |
Genome Summary
Clostridioides difficile str. RA09_70
Accession NumberJPPA00000000.1
Gene Summary
Adenine Count
1519866 bp
Thymine Count
1506247 bp
Guanine Count
608909 bp
Cytosine Count
597184 bp
Genome Length
4232226 bp
Protein-coding Genes
3643 genes
Non-Coding Genes
111 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| cdp-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase | IM33_07200 | Q5HGE8 | + | 1455985 - 1456527 | 19894.4 |
| recombinase reca | IM33_07205 | Q18BJ4 | + | 1456815 - 1457861 | 37409.9 |
| ribonuclease | IM33_07210 | Q18BJ3 | + | 1458037 - 1459578 | 58153.0 |
| diguanylate cyclase | IM33_07215 | Not Available | + | 1459891 - 1462230 | 90634.2 |
| dna helicase | IM33_07220 | Not Available | + | 1462601 - 1464382 | 69597.8 |
| signal peptidase | IM33_07225 | Q5HHB9 | - | 1464467 - 1464997 | 19686.0 |
| udp pyrophosphate phosphatase | IM33_07230 | Q18BJ5 | - | 1465037 - 1465861 | 30640.6 |
| recombinase | IM33_07235 | Not Available | + | 1466118 - 1467029 | 35699.0 |
| adenylosuccinate lyase | IM33_07240 | P54822 | + | 1467170 - 1468615 | 54990.3 |
| marr family transcriptional regulator | IM33_07245 | Not Available | + | 1468928 - 1469380 | 17575.3 |
Pathways
1 pathway
No pathways found
No metabolic pathways have been associated with this bacterium yet.