Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Peptostreptococcales
Family
Peptostreptococcaceae
Genus
Clostridioides
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Peptostreptococcales |
| Family | Peptostreptococcaceae |
| Genus | Clostridioides |
| Species | Clostridioides difficile |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 1 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Chains - Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Chemoorganotroph |
| Pathogenicity | Human |
Genome Summary
Clostridioides difficile str. RA09_70
Accession NumberJPPA00000000.1
Gene Summary
Adenine Count
1519866 bp
Thymine Count
1506247 bp
Guanine Count
608909 bp
Cytosine Count
597184 bp
Genome Length
4232226 bp
Protein-coding Genes
3643 genes
Non-Coding Genes
111 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| 6-phosphogluconate dehydratase | IM33_07150 | Q8R9U5 | + | 1443223 - 1444068 | 31492.0 |
| polyribonucleotide nucleotidyltransferase | IM33_07155 | Q18BI4 | + | 1444192 - 1446303 | 77852.5 |
| polysaccharide deacetylase | IM33_07160 | O34798 | + | 1446569 - 1447312 | 27995.3 |
| zinc protease | IM33_07165 | Q04805 | + | 1447469 - 1448716 | 47306.0 |
| ylmc/ymxh family sporulation protein | IM33_07170 | Q04811 | + | 1448751 - 1448996 | 9096.23 |
| aspartate kinase | IM33_07175 | Q04795 | + | 1449006 - 1450229 | 44677.7 |
| clp protease | IM33_07180 | Q9KA93 | + | 1450341 - 1451075 | 27102.5 |
| cell division protein ftsk | IM33_07185 | Q8XJS8 | + | 1451198 - 1453609 | 88405.3 |
| trna 2-selenouridine synthase | IM33_07190 | B1JDU1 | + | 1453612 - 1454670 | 41032.3 |
| ribosomal protein s12 methylthiotransferase | IM33_07195 | Q18BJ2 | + | 1454664 - 1455998 | 50773.9 |
Pathways
1 pathway
No pathways found
No metabolic pathways have been associated with this bacterium yet.