Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Peptostreptococcales
Family
Peptostreptococcaceae
Genus
Clostridioides
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Peptostreptococcales |
| Family | Peptostreptococcaceae |
| Genus | Clostridioides |
| Species | Clostridioides difficile |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 1 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Chains - Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Chemoorganotroph |
| Pathogenicity | Human |
Genome Summary
Clostridioides difficile str. RA09_70
Accession NumberJPPA00000000.1
Gene Summary
Adenine Count
1519866 bp
Thymine Count
1506247 bp
Guanine Count
608909 bp
Cytosine Count
597184 bp
Genome Length
4232226 bp
Protein-coding Genes
3643 genes
Non-Coding Genes
111 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| ribosome maturation protein rimp | IM33_07100 | Q18BH3 | + | 1435060 - 1435521 | 17784.3 |
| transcription elongation factor nusa | IM33_07105 | Q9KA74 | + | 1435552 - 1436706 | 43567.6 |
| hypothetical protein | IM33_07110 | P32728 | + | 1436713 - 1436994 | 10689.2 |
| 50s ribosomal protein l7 | IM33_07115 | P55768 | + | 1436984 - 1437295 | 11436.0 |
| translation initiation factor if-2 | IM33_07120 | Q18BH4 | + | 1437317 - 1439257 | 69707.9 |
| ribosome-binding factor a | IM33_07125 | Q18BH6 | + | 1439300 - 1439680 | 14449.3 |
| rna-binding protein | IM33_07130 | Q5SM25 | + | 1439673 - 1440644 | 36254.3 |
| pseudouridine synthase | IM33_07135 | Q18BH7 | + | 1440657 - 1441562 | 34095.1 |
| riboflavin biosynthesis protein ribc | IM33_07140 | P57250 | + | 1441693 - 1442622 | 35351.7 |
| 30s ribosomal protein s15 | IM33_07145 | Q18BI0 | + | 1442726 - 1442983 | 9761.08 |
Pathways
1 pathway
No pathways found
No metabolic pathways have been associated with this bacterium yet.