Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Peptostreptococcales
Family
Peptostreptococcaceae
Genus
Clostridioides
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Peptostreptococcales |
| Family | Peptostreptococcaceae |
| Genus | Clostridioides |
| Species | Clostridioides difficile |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 1 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Chains - Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Chemoorganotroph |
| Pathogenicity | Human |
Genome Summary
Clostridioides difficile str. RA09_70
Accession NumberJPPA00000000.1
Gene Summary
Adenine Count
1519866 bp
Thymine Count
1506247 bp
Guanine Count
608909 bp
Cytosine Count
597184 bp
Genome Length
4232226 bp
Protein-coding Genes
3643 genes
Non-Coding Genes
111 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| segregation and condensation protein b | IM33_07045 | Q18BG3 | + | 1421795 - 1422334 | 21075.8 |
| hypothetical protein | IM33_07050 | Not Available | + | 1422497 - 1423126 | 24299.7 |
| spore protein | IM33_07055 | Not Available | + | 1423080 - 1423502 | 14881.8 |
| marr family transcriptional regulator | IM33_07060 | Not Available | + | 1423755 - 1424195 | 17346.0 |
| aminopeptidase a | IM33_07065 | Q0SQ50 | + | 1424211 - 1425662 | 52787.6 |
| membrane protein | IM33_07070 | Not Available | - | 1425757 - 1426425 | 26080.6 |
| nucleotide pyrophosphohydrolase | IM33_07080 | Not Available | - | 1427012 - 1427332 | 12249.9 |
| nad-dependent deacetylase | IM33_07085 | Q8XNS6 | - | 1427452 - 1428189 | 27107.5 |
| mannosyl-glycoprotein endo-beta-n-acetylglucosamidase | IM33_07090 | O33635 | + | 1428530 - 1430341 | 65136.7 |
| dna polymerase iii polc | IM33_07095 | Q8XJR3 | + | 1430557 - 1434855 | 162501.0 |
Pathways
1 pathway
No pathways found
No metabolic pathways have been associated with this bacterium yet.