Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Peptostreptococcales
Family
Peptostreptococcaceae
Genus
Clostridioides
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Peptostreptococcales |
| Family | Peptostreptococcaceae |
| Genus | Clostridioides |
| Species | Clostridioides difficile |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 1 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Chains - Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Chemoorganotroph |
| Pathogenicity | Human |
Genome Summary
Clostridioides difficile str. RA09_70
Accession NumberJPPA00000000.1
Gene Summary
Adenine Count
1519866 bp
Thymine Count
1506247 bp
Guanine Count
608909 bp
Cytosine Count
597184 bp
Genome Length
4232226 bp
Protein-coding Genes
3643 genes
Non-Coding Genes
111 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | IM33_06945 | O34528 | + | 1401363 - 1402628 | 47262.8 |
| acetyltransferase | IM33_06950 | Not Available | + | 1402659 - 1403429 | 29591.1 |
| asnc family transcriptional regulator | IM33_06955 | O34527 | + | 1403538 - 1403984 | 16478.1 |
| cysteine desulfurase | IM33_06960 | Not Available | + | 1404002 - 1405195 | 43749.5 |
| nitrogen fixation protein nifu | IM33_06965 | P0DMG1 | + | 1405249 - 1405689 | 15898.9 |
| thiouridylase | IM33_06970 | Q18BE2 | + | 1405974 - 1407053 | 40612.9 |
| alanyl-trna synthetase | IM33_06975 | Q18BE7 | + | 1407503 - 1410142 | 98221.7 |
| hypothetical protein | IM33_06980 | Q18BE6 | + | 1410167 - 1410424 | 9891.85 |
| membrane protein | IM33_06985 | Not Available | + | 1410434 - 1412605 | 80428.1 |
| holliday junction resolvase | IM33_06990 | Q18BF1 | + | 1412757 - 1413182 | 15572.3 |
Pathways
1 pathway
No pathways found
No metabolic pathways have been associated with this bacterium yet.