Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Peptostreptococcales
Family
Peptostreptococcaceae
Genus
Clostridioides
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Peptostreptococcales |
| Family | Peptostreptococcaceae |
| Genus | Clostridioides |
| Species | Clostridioides difficile |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 1 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Chains - Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Chemoorganotroph |
| Pathogenicity | Human |
Genome Summary
Clostridioides difficile str. RA09_70
Accession NumberJPPA00000000.1
Gene Summary
Adenine Count
1519866 bp
Thymine Count
1506247 bp
Guanine Count
608909 bp
Cytosine Count
597184 bp
Genome Length
4232226 bp
Protein-coding Genes
3643 genes
Non-Coding Genes
111 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| abc transporter permease | IM33_06895 | Not Available | - | 1389856 - 1390920 | 40042.5 |
| abc transporter permease | IM33_06900 | Not Available | - | 1390923 - 1392020 | 41766.2 |
| antibiotic abc transporter atp-binding protein | IM33_06905 | Not Available | - | 1392034 - 1392969 | 34849.7 |
| luxr family transcriptional regulator | IM33_06910 | P94439 | - | 1393102 - 1393746 | 24241.5 |
| histidine kinase | IM33_06915 | P94438 | - | 1393739 - 1394902 | 44846.8 |
| hypothetical protein | IM33_06920 | Q18BD4 | + | 1395087 - 1395431 | 13301.3 |
| magnesium chelatase | IM33_06925 | P45049 | + | 1395462 - 1397066 | 61269.4 |
| dna polymerase iii subunit beta | IM33_06930 | P43862 | + | 1397085 - 1398185 | 41128.8 |
| dna topoisomerase i | IM33_06935 | Q9KA23 | + | 1398218 - 1400305 | 79105.6 |
| gtp-sensing transcriptional pleiotropic repressor cody | IM33_06940 | Q895L3 | + | 1400470 - 1401255 | 28731.5 |
Pathways
1 pathway
No pathways found
No metabolic pathways have been associated with this bacterium yet.