Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Peptostreptococcales
Family
Peptostreptococcaceae
Genus
Clostridioides
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Peptostreptococcales |
| Family | Peptostreptococcaceae |
| Genus | Clostridioides |
| Species | Clostridioides difficile |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 1 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Chains - Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Chemoorganotroph |
| Pathogenicity | Human |
Genome Summary
Clostridioides difficile str. RA09_70
Accession NumberJPPA00000000.1
Gene Summary
Adenine Count
1519866 bp
Thymine Count
1506247 bp
Guanine Count
608909 bp
Cytosine Count
597184 bp
Genome Length
4232226 bp
Protein-coding Genes
3643 genes
Non-Coding Genes
111 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| vanz family protein | IM33_06735 | Q06242 | + | 1359083 - 1359592 | 19001.4 |
| dna-directed rna polymerase | IM33_06740 | Not Available | - | 1359696 - 1359890 | 7583.15 |
| hypothetical protein | IM33_06750 | Not Available | + | 1361806 - 1362018 | 7456.31 |
| membrane protein | IM33_06755 | Not Available | - | 1362015 - 1362884 | 31471.1 |
| conjugal transfer protein | IM33_06760 | Not Available | - | 1362899 - 1363039 | 4500.58 |
| hypothetical protein | IM33_06770 | Not Available | + | 1364181 - 1364543 | 14234.0 |
| hypothetical protein | IM33_06775 | Not Available | + | 1364527 - 1365246 | 27789.3 |
| n-terminal cleavage protein | IM33_06780 | Not Available | + | 1365239 - 1365685 | 17312.2 |
| hypothetical protein | IM33_06785 | Not Available | + | 1365675 - 1366205 | 20418.8 |
| elongation factor p | IM33_06790 | Q18BA9 | + | 1366517 - 1367074 | 20883.6 |
Pathways
1 pathway
No pathways found
No metabolic pathways have been associated with this bacterium yet.