Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Peptostreptococcales
Family
Peptostreptococcaceae
Genus
Clostridioides
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Peptostreptococcales |
| Family | Peptostreptococcaceae |
| Genus | Clostridioides |
| Species | Clostridioides difficile |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 1 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Chains - Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Chemoorganotroph |
| Pathogenicity | Human |
Genome Summary
Clostridioides difficile str. RA09_70
Accession NumberJPPA00000000.1
Gene Summary
Adenine Count
1519866 bp
Thymine Count
1506247 bp
Guanine Count
608909 bp
Cytosine Count
597184 bp
Genome Length
4232226 bp
Protein-coding Genes
3643 genes
Non-Coding Genes
111 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| phosphopentomutase | IM33_06670 | Q18B86 | + | 1345386 - 1346558 | 43786.2 |
| purine nucleoside phosphorylase | IM33_06675 | P77834 | + | 1346614 - 1347426 | 29339.6 |
| thymidine phosphorylase | IM33_06680 | P77836 | + | 1347630 - 1348955 | 48280.2 |
| aminodeoxychorismate lyase | IM33_06685 | O34758 | + | 1349159 - 1350238 | 41076.8 |
| methyltransferase | IM33_06690 | O32036 | + | 1350410 - 1351084 | 25301.8 |
| peptidase u32 | IM33_06695 | O32034 | + | 1351071 - 1352318 | 47755.3 |
| penicillin-binding protein | IM33_06700 | Q03524 | + | 1352390 - 1354054 | 62686.8 |
| serine recombinase | IM33_06710 | Not Available | - | 1354462 - 1355976 | 58588.7 |
| cell surface protein | IM33_06715 | Not Available | + | 1356153 - 1357598 | 52992.3 |
| hypothetical protein | IM33_06730 | Not Available | + | 1358622 - 1358840 | 8604.14 |
Pathways
1 pathway
No pathways found
No metabolic pathways have been associated with this bacterium yet.