Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Peptostreptococcales
Family
Peptostreptococcaceae
Genus
Clostridioides
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Peptostreptococcales |
| Family | Peptostreptococcaceae |
| Genus | Clostridioides |
| Species | Clostridioides difficile |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 1 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Chains - Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Chemoorganotroph |
| Pathogenicity | Human |
Genome Summary
Clostridioides difficile str. RA09_70
Accession NumberJPPA00000000.1
Gene Summary
Adenine Count
1519866 bp
Thymine Count
1506247 bp
Guanine Count
608909 bp
Cytosine Count
597184 bp
Genome Length
4232226 bp
Protein-coding Genes
3643 genes
Non-Coding Genes
111 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| peptidase s55 | IM33_06620 | Not Available | + | 1336134 - 1337195 | 40032.6 |
| chemotaxis protein chey | IM33_06625 | P52938 | + | 1337352 - 1338161 | 30378.2 |
| hypothetical protein | IM33_06630 | Not Available | + | 1338573 - 1339694 | 41072.2 |
| hypothetical protein | IM33_06635 | Not Available | + | 1339712 - 1340587 | 32102.2 |
| glycosyl transferase | IM33_06640 | B3VA58 | + | 1340611 - 1341303 | 25858.5 |
| glycosyl transferase | IM33_06645 | Not Available | + | 1341311 - 1342135 | 30656.2 |
| hypothetical protein | IM33_06650 | Not Available | + | 1342140 - 1343207 | 39371.4 |
| adp-ribose pyrophosphatase | IM33_06655 | P54570 | + | 1343209 - 1343745 | 19955.0 |
| membrane protein | IM33_06660 | Not Available | + | 1343813 - 1344418 | 22897.6 |
| integrase | IM33_06665 | Q7ZAM3 | + | 1344430 - 1345344 | 35185.0 |
Pathways
1 pathway
No pathways found
No metabolic pathways have been associated with this bacterium yet.