Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Peptostreptococcales
Family
Peptostreptococcaceae
Genus
Clostridioides
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Peptostreptococcales |
| Family | Peptostreptococcaceae |
| Genus | Clostridioides |
| Species | Clostridioides difficile |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 1 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Chains - Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Chemoorganotroph |
| Pathogenicity | Human |
Genome Summary
Clostridioides difficile str. RA09_70
Accession NumberJPPA00000000.1
Gene Summary
Adenine Count
1519866 bp
Thymine Count
1506247 bp
Guanine Count
608909 bp
Cytosine Count
597184 bp
Genome Length
4232226 bp
Protein-coding Genes
3643 genes
Non-Coding Genes
111 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| exodeoxyribonuclease vii large subunit | IM33_06565 | Q18B66 | + | 1326419 - 1327624 | 45316.9 |
| exodeoxyribonuclease vii small subunit | IM33_06570 | B0TEJ2 | + | 1327626 - 1327841 | 8303.73 |
| farnesyl-diphosphate synthase | IM33_06575 | B1XJV9 | + | 1327844 - 1328731 | 32677.4 |
| acid phosphatase | IM33_06580 | O32107 | + | 1328761 - 1329198 | 15761.7 |
| 1-deoxy-d-xylulose-5-phosphate synthase | IM33_06585 | Q18B68 | + | 1329232 - 1331097 | 69133.6 |
| rrna methyltransferase | IM33_06590 | P19672 | + | 1331230 - 1332042 | 30261.6 |
| dna methylase | IM33_06595 | Q9K974 | + | 1332080 - 1333741 | 63647.0 |
| hypothetical protein | IM33_06600 | Not Available | + | 1333955 - 1334821 | 33285.6 |
| acetyltransferase | IM33_06605 | Q18B70 | - | 1334981 - 1335460 | 18355.4 |
| spermidine acetyltransferase | IM33_06610 | P39909 | - | 1335533 - 1335973 | 16994.3 |
Pathways
1 pathway
No pathways found
No metabolic pathways have been associated with this bacterium yet.