Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Peptostreptococcales
Family
Peptostreptococcaceae
Genus
Clostridioides
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Peptostreptococcales |
| Family | Peptostreptococcaceae |
| Genus | Clostridioides |
| Species | Clostridioides difficile |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 1 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Chains - Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Chemoorganotroph |
| Pathogenicity | Human |
Genome Summary
Clostridioides difficile str. RA09_70
Accession NumberJPPA00000000.1
Gene Summary
Adenine Count
1519866 bp
Thymine Count
1506247 bp
Guanine Count
608909 bp
Cytosine Count
597184 bp
Genome Length
4232226 bp
Protein-coding Genes
3643 genes
Non-Coding Genes
111 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| stage iii sporulation protein ab | IM33_06515 | Not Available | + | 1319927 - 1320448 | 20403.2 |
| stage iii sporulation protein ac | IM33_06520 | Not Available | + | 1320465 - 1320662 | 7183.18 |
| stage iii sporulation protein ad | IM33_06525 | Not Available | + | 1320678 - 1321064 | 14076.2 |
| stage iii sporulation protein ae | IM33_06530 | Not Available | + | 1321149 - 1322354 | 44254.6 |
| stage iii sporulation protein af | IM33_06535 | Not Available | + | 1322415 - 1323032 | 23083.7 |
| stage iii sporulation protein ag | IM33_06540 | Not Available | + | 1323044 - 1323598 | 19910.4 |
| stage iii sporulation protein ah | IM33_06545 | Not Available | + | 1323625 - 1324305 | 25676.5 |
| alkaline-shock protein | IM33_06550 | P54519 | + | 1324415 - 1324777 | 13165.9 |
| nitrogen utilization protein b | IM33_06555 | Q18B61 | + | 1324862 - 1325368 | 19527.4 |
| o-sialoglycoprotein endopeptidase | IM33_06560 | B9DML1 | + | 1325352 - 1326422 | 40037.1 |
Pathways
1 pathway
No pathways found
No metabolic pathways have been associated with this bacterium yet.