Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Peptostreptococcales
Family
Peptostreptococcaceae
Genus
Clostridioides
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Peptostreptococcales |
| Family | Peptostreptococcaceae |
| Genus | Clostridioides |
| Species | Clostridioides difficile |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 1 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Chains - Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Chemoorganotroph |
| Pathogenicity | Human |
Genome Summary
Clostridioides difficile str. RA09_70
Accession NumberJPPA00000000.1
Gene Summary
Adenine Count
1519866 bp
Thymine Count
1506247 bp
Guanine Count
608909 bp
Cytosine Count
597184 bp
Genome Length
4232226 bp
Protein-coding Genes
3643 genes
Non-Coding Genes
111 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| 3-ketoacyl-acp reductase | IM33_06460 | Not Available | + | 1307005 - 1307754 | 26741.6 |
| acyl carrier protein | IM33_06465 | A3DDY8 | + | 1307818 - 1308042 | 8366.0 |
| 3-oxoacyl-acp synthase | IM33_06470 | O34340 | + | 1308072 - 1309310 | 44038.7 |
| atpase aaa | IM33_06480 | Not Available | + | 1311282 - 1313282 | 75997.1 |
| hypothetical protein | IM33_06485 | Not Available | + | 1313640 - 1313885 | 8918.86 |
| glutamine amidotransferase | IM33_06490 | P49865 | + | 1313921 - 1314646 | 26917.7 |
| amino acid permease | IM33_06495 | P9WQM4 | + | 1314668 - 1315981 | 46390.6 |
| gnat family acetyltransferase | IM33_06500 | Not Available | + | 1316187 - 1316726 | 19911.2 |
| fructose 1,6-bisphosphatase | IM33_06505 | Q18B55 | + | 1316815 - 1318800 | 76388.7 |
| stage iii sporulation protein aa | IM33_06510 | Q01367 | + | 1318969 - 1319937 | 36372.2 |
Pathways
1 pathway
No pathways found
No metabolic pathways have been associated with this bacterium yet.