Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Peptostreptococcales
Family
Peptostreptococcaceae
Genus
Clostridioides
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Peptostreptococcales |
| Family | Peptostreptococcaceae |
| Genus | Clostridioides |
| Species | Clostridioides difficile |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 1 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Chains - Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Chemoorganotroph |
| Pathogenicity | Human |
Genome Summary
Clostridioides difficile str. RA09_70
Accession NumberJPPA00000000.1
Gene Summary
Adenine Count
1519866 bp
Thymine Count
1506247 bp
Guanine Count
608909 bp
Cytosine Count
597184 bp
Genome Length
4232226 bp
Protein-coding Genes
3643 genes
Non-Coding Genes
111 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| 2-hydroxy-acid oxidase | IM33_06410 | H6LBS1 | + | 1296777 - 1298168 | 51434.1 |
| hypothetical protein | IM33_06415 | Q18B37 | - | 1298444 - 1299724 | 48951.2 |
| acetate kinase | IM33_06420 | Q18B36 | + | 1300180 - 1301376 | 43309.6 |
| hypothetical protein | IM33_06425 | Not Available | + | 1301469 - 1301993 | 20140.7 |
| 50s ribosomal protein l32 | IM33_06430 | Q18B38 | + | 1302017 - 1302193 | 6497.97 |
| deor faimly transcriptional regulator | IM33_06435 | B0K9Y3 | + | 1302399 - 1302956 | 21309.1 |
| phosphate acyltransferase | IM33_06440 | Q18B41 | + | 1302967 - 1303989 | 36750.5 |
| 3-oxoacyl-acp synthase | IM33_06445 | Q18B40 | + | 1304015 - 1305001 | 35053.1 |
| 2-nitropropane dioxygenase | IM33_06450 | Q9I4V0 | + | 1305110 - 1306039 | 32618.1 |
| acp s-malonyltransferase | IM33_06455 | P71019 | + | 1306055 - 1307005 | 34361.4 |
Pathways
1 pathway
No pathways found
No metabolic pathways have been associated with this bacterium yet.