Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Peptostreptococcales
Family
Peptostreptococcaceae
Genus
Clostridioides
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Peptostreptococcales |
| Family | Peptostreptococcaceae |
| Genus | Clostridioides |
| Species | Clostridioides difficile |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 1 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Chains - Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Chemoorganotroph |
| Pathogenicity | Human |
Genome Summary
Clostridioides difficile str. RA09_70
Accession NumberJPPA00000000.1
Gene Summary
Adenine Count
1519866 bp
Thymine Count
1506247 bp
Guanine Count
608909 bp
Cytosine Count
597184 bp
Genome Length
4232226 bp
Protein-coding Genes
3643 genes
Non-Coding Genes
111 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| 50s ribosomal protein l27 | IM33_06360 | Q18B22 | + | 1286702 - 1286992 | 10427.8 |
| gtpase | IM33_06365 | Q18B27 | + | 1287103 - 1288380 | 46872.0 |
| rna-binding protein, yhby family | IM33_06370 | Not Available | + | 1288410 - 1288778 | 13688.8 |
| homoserine dehydrogenase | IM33_06375 | P19582 | + | 1289079 - 1290281 | 44156.0 |
| integrase | IM33_06380 | Not Available | - | 1290404 - 1290970 | 21902.7 |
| membrane protein | IM33_06385 | O34765 | - | 1291238 - 1292497 | 46031.4 |
| gntr family transcriptional regulator | IM33_06390 | P0ACL6 | + | 1292622 - 1293335 | 27360.2 |
| lactate racemization operon protein lara | IM33_06395 | F9USS9 | + | 1293453 - 1294727 | 46839.9 |
| electron transfer flavoprotein subunit beta | IM33_06400 | H6LBB0 | + | 1294744 - 1295532 | 29064.0 |
| electron transfer flavoprotein subunit alpha | IM33_06405 | H6LBB1 | + | 1295546 - 1296766 | 44916.9 |
Pathways
1 pathway
No pathways found
No metabolic pathways have been associated with this bacterium yet.