Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Peptostreptococcales
Family
Peptostreptococcaceae
Genus
Clostridioides
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Peptostreptococcales |
| Family | Peptostreptococcaceae |
| Genus | Clostridioides |
| Species | Clostridioides difficile |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 1 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Chains - Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Chemoorganotroph |
| Pathogenicity | Human |
Genome Summary
Clostridioides difficile str. RA09_70
Accession NumberJPPA00000000.1
Gene Summary
Adenine Count
1519866 bp
Thymine Count
1506247 bp
Guanine Count
608909 bp
Cytosine Count
597184 bp
Genome Length
4232226 bp
Protein-coding Genes
3643 genes
Non-Coding Genes
111 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| cell division inhibitor mind | IM33_06305 | Q01464 | + | 1276470 - 1277267 | 29161.7 |
| cell division topological specificity factor mine | IM33_06310 | Q18B11 | + | 1277285 - 1277569 | 10700.2 |
| rod shape-determining protein roda | IM33_06315 | Q39YM0 | + | 1277654 - 1278784 | 41305.6 |
| methylglyoxal synthase | IM33_06320 | Q18B16 | + | 1278825 - 1279238 | 15236.5 |
| beta-lactamase | IM33_06330 | Q97K92 | - | 1280445 - 1281638 | 44899.2 |
| fe-s oxidoreductase | IM33_06335 | Q58376 | + | 1281957 - 1283801 | 70775.3 |
| radical sam protein | IM33_06340 | Not Available | + | 1283803 - 1284504 | 26916.8 |
| ribonuclease g | IM33_06345 | P0A9J2 | + | 1284522 - 1285943 | 54498.6 |
| 50s ribosomal protein l21 | IM33_06350 | Q18B24 | + | 1286045 - 1286356 | 11330.8 |
| ribosomal protein | IM33_06355 | Not Available | + | 1286371 - 1286688 | 11970.6 |
Pathways
1 pathway
No pathways found
No metabolic pathways have been associated with this bacterium yet.