Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Peptostreptococcales
Family
Peptostreptococcaceae
Genus
Clostridioides
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Peptostreptococcales |
| Family | Peptostreptococcaceae |
| Genus | Clostridioides |
| Species | Clostridioides difficile |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 1 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Chains - Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Chemoorganotroph |
| Pathogenicity | Human |
Genome Summary
Clostridioides difficile str. RA09_70
Accession NumberJPPA00000000.1
Gene Summary
Adenine Count
1519866 bp
Thymine Count
1506247 bp
Guanine Count
608909 bp
Cytosine Count
597184 bp
Genome Length
4232226 bp
Protein-coding Genes
3643 genes
Non-Coding Genes
111 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| rnfabcdge type electron transport complex subunit e | IM33_06255 | H6LC29 | + | 1266460 - 1267053 | 20717.5 |
| electron transporter rnfa | IM33_06260 | H6LC28 | + | 1267068 - 1267643 | 20382.0 |
| electron transporter rnfb | IM33_06265 | H6LC27 | + | 1267659 - 1268630 | 33728.0 |
| septum formation inhibitor maf | IM33_06270 | Q18B07 | + | 1268850 - 1269434 | 21715.3 |
| dna repair protein radc | IM33_06275 | Q18B06 | + | 1269479 - 1270138 | 24792.3 |
| rod shape-determining protein mreb | IM33_06280 | Not Available | + | 1270208 - 1271269 | 37950.2 |
| rod shape-determining protein mrec | IM33_06285 | Not Available | + | 1271279 - 1272172 | 32275.6 |
| rod shape-determining protein mred | IM33_06290 | Not Available | + | 1272187 - 1272675 | 17737.6 |
| penicillin-binding protein | IM33_06295 | Not Available | + | 1272687 - 1275665 | 111374.0 |
| septum site-determining protein minc | IM33_06300 | Q18B13 | + | 1275763 - 1276446 | 25107.8 |
Pathways
1 pathway
No pathways found
No metabolic pathways have been associated with this bacterium yet.