Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Peptostreptococcales
Family
Peptostreptococcaceae
Genus
Clostridioides
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Peptostreptococcales |
| Family | Peptostreptococcaceae |
| Genus | Clostridioides |
| Species | Clostridioides difficile |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 1 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Chains - Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Chemoorganotroph |
| Pathogenicity | Human |
Genome Summary
Clostridioides difficile str. RA09_70
Accession NumberJPPA00000000.1
Gene Summary
Adenine Count
1519866 bp
Thymine Count
1506247 bp
Guanine Count
608909 bp
Cytosine Count
597184 bp
Genome Length
4232226 bp
Protein-coding Genes
3643 genes
Non-Coding Genes
111 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| lytic transglycosylase | IM33_06205 | Not Available | + | 1256852 - 1257406 | 21459.8 |
| abc transporter substrate-binding protein | IM33_06210 | Not Available | + | 1257406 - 1259124 | 64724.8 |
| heavy metal-associated domain protein | IM33_06215 | Not Available | + | 1259197 - 1259409 | 7731.47 |
| hypothetical protein | IM33_06220 | Not Available | + | 1259611 - 1260210 | 23814.9 |
| lactoylglutathione lyase | IM33_06225 | Not Available | + | 1260487 - 1260858 | 14566.1 |
| ligand-binding protein sh3 | IM33_06230 | Not Available | + | 1260990 - 1262270 | 44626.3 |
| hypothetical protein | IM33_06235 | Not Available | + | 1262381 - 1263325 | 36236.7 |
| electron transporter rnfc | IM33_06240 | H6LC32 | + | 1263541 - 1264878 | 48098.3 |
| nadh:ubiquinone oxidoreductase | IM33_06245 | H6LC31 | + | 1264901 - 1265878 | 34964.7 |
| electron transporter | IM33_06250 | H6LC30 | + | 1265878 - 1266447 | 19473.2 |
Pathways
1 pathway
No pathways found
No metabolic pathways have been associated with this bacterium yet.