Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Peptostreptococcales
Family
Peptostreptococcaceae
Genus
Clostridioides
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Peptostreptococcales |
| Family | Peptostreptococcaceae |
| Genus | Clostridioides |
| Species | Clostridioides difficile |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 1 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Chains - Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Chemoorganotroph |
| Pathogenicity | Human |
Genome Summary
Clostridioides difficile str. RA09_70
Accession NumberJPPA00000000.1
Gene Summary
Adenine Count
1519866 bp
Thymine Count
1506247 bp
Guanine Count
608909 bp
Cytosine Count
597184 bp
Genome Length
4232226 bp
Protein-coding Genes
3643 genes
Non-Coding Genes
111 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| membrane protein | IM33_06105 | Not Available | + | 1235680 - 1236867 | 42205.3 |
| peptidase m20 | IM33_06110 | P58156 | + | 1236927 - 1238090 | 41764.0 |
| zinc transporter zupt | IM33_06115 | Q8XMG8 | + | 1238242 - 1239045 | 28925.1 |
| hypothetical protein | IM33_06120 | Not Available | + | 1239150 - 1239701 | 22226.3 |
| chemotaxis protein chey | IM33_06125 | P94514 | + | 1239952 - 1240665 | 28305.5 |
| histidine kinase | IM33_06130 | Not Available | + | 1240659 - 1242038 | 54094.6 |
| hypothetical protein | IM33_06135 | Not Available | + | 1242279 - 1242968 | 26037.1 |
| dehydrogenase | IM33_06140 | Q30W70 | + | 1243189 - 1245561 | 88820.9 |
| pyruvate formate lyase-activating protein | IM33_06145 | A0A318FEA4 | + | 1245576 - 1246478 | 34389.6 |
| dna-binding protein | IM33_06150 | Not Available | + | 1246498 - 1247049 | 21025.3 |
Pathways
1 pathway
No pathways found
No metabolic pathways have been associated with this bacterium yet.