Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Peptostreptococcales
Family
Peptostreptococcaceae
Genus
Clostridioides
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Peptostreptococcales |
| Family | Peptostreptococcaceae |
| Genus | Clostridioides |
| Species | Clostridioides difficile |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 1 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Chains - Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Chemoorganotroph |
| Pathogenicity | Human |
Genome Summary
Clostridioides difficile str. RA09_70
Accession NumberJPPA00000000.1
Gene Summary
Adenine Count
1519866 bp
Thymine Count
1506247 bp
Guanine Count
608909 bp
Cytosine Count
597184 bp
Genome Length
4232226 bp
Protein-coding Genes
3643 genes
Non-Coding Genes
111 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | IM33_05990 | Q18AS6 | + | 1214836 - 1215045 | 8391.03 |
| aminopeptidase 1 | IM33_05995 | Q97K30 | + | 1215065 - 1216459 | 51446.5 |
| gntr family transcriptional regulator | IM33_06000 | O32152 | + | 1216699 - 1217451 | 29052.1 |
| pts mannose transporter subunit iic | IM33_06005 | Not Available | + | 1217476 - 1217889 | 15153.3 |
| membrane complex biogenesis protein, btpa family | IM33_06010 | Not Available | + | 1217893 - 1218636 | 28098.9 |
| pts sugar transporter | IM33_06015 | Q5XCC7 | + | 1218636 - 1219106 | 17433.3 |
| pts sugar transporter | IM33_06020 | P42905 | + | 1219117 - 1219881 | 27012.1 |
| pts mannose transporter subunit iid | IM33_06025 | Not Available | + | 1219865 - 1220707 | 31034.8 |
| lysr family transcriptional regulator | IM33_06030 | A0T0G2 | - | 1220763 - 1221668 | 34666.0 |
| hypothetical protein | IM33_06035 | Not Available | + | 1222031 - 1222765 | 27650.4 |
Pathways
1 pathway
No pathways found
No metabolic pathways have been associated with this bacterium yet.