Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Peptostreptococcales
Family
Peptostreptococcaceae
Genus
Clostridioides
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Peptostreptococcales |
| Family | Peptostreptococcaceae |
| Genus | Clostridioides |
| Species | Clostridioides difficile |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 1 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Chains - Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Chemoorganotroph |
| Pathogenicity | Human |
Genome Summary
Clostridioides difficile str. RA09_70
Accession NumberJPPA00000000.1
Gene Summary
Adenine Count
1519866 bp
Thymine Count
1506247 bp
Guanine Count
608909 bp
Cytosine Count
597184 bp
Genome Length
4232226 bp
Protein-coding Genes
3643 genes
Non-Coding Genes
111 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| acyl-coa dehydrogenase | IM33_05890 | P52042 | + | 1196441 - 1197577 | 41304.8 |
| electron transfer flavoprotein subunit beta | IM33_05895 | P52040 | + | 1197636 - 1198418 | 28316.2 |
| electron transfer flavoprotein subunit alpha | IM33_05900 | P71153 | + | 1198437 - 1199447 | 36061.7 |
| enoyl-coa hydratase | IM33_05905 | P45361 | + | 1199466 - 1200263 | 28382.3 |
| 3-hydroxybutyryl-coa dehydrogenase | IM33_05910 | P45364 | + | 1200361 - 1201206 | 30652.5 |
| acetyl-coa acetyltransferase | IM33_05915 | Q18AR0 | + | 1201293 - 1202468 | 40833.6 |
| pseudouridylate synthase | IM33_05920 | Q45480 | + | 1202646 - 1203548 | 34924.3 |
| hypothetical protein | IM33_05925 | Not Available | + | 1203562 - 1204566 | 38871.1 |
| acyl carrier protein | IM33_05930 | Not Available | - | 1204723 - 1204950 | 8530.05 |
| hypothetical protein | IM33_05935 | Not Available | + | 1205122 - 1205547 | 16681.2 |
Pathways
1 pathway
No pathways found
No metabolic pathways have been associated with this bacterium yet.