Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Peptostreptococcales
Family
Peptostreptococcaceae
Genus
Clostridioides
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Peptostreptococcales |
| Family | Peptostreptococcaceae |
| Genus | Clostridioides |
| Species | Clostridioides difficile |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 1 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Chains - Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Chemoorganotroph |
| Pathogenicity | Human |
Genome Summary
Clostridioides difficile str. RA09_70
Accession NumberJPPA00000000.1
Gene Summary
Adenine Count
1519866 bp
Thymine Count
1506247 bp
Guanine Count
608909 bp
Cytosine Count
597184 bp
Genome Length
4232226 bp
Protein-coding Genes
3643 genes
Non-Coding Genes
111 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | IM33_00280 | Not Available | + | 43420 - 45993 | 98860.3 |
| peptide abc transporter atp-binding protein | IM33_00285 | Not Available | + | 46010 - 46675 | 24768.4 |
| serine protease | IM33_00290 | Not Available | + | 46687 - 47697 | 38641.0 |
| abc transporter atp-binding protein | IM33_00295 | Q2LVL0 | + | 47731 - 49506 | 66878.0 |
| ferredoxin | IM33_00300 | P80168 | - | 49896 - 50066 | 5522.42 |
| hypothetical protein | IM33_00305 | Not Available | + | 50351 - 51418 | 40314.7 |
| carbon monoxide dehydrogenase | IM33_00310 | Q58138 | + | 51605 - 53506 | 68147.6 |
| nitrate reductase | IM33_00315 | Not Available | + | 53499 - 53972 | 17755.2 |
| nitrate reductase | IM33_00320 | Q8L3B0 | + | 53947 - 55173 | 45755.9 |
| sam-dependent methyltransferase | IM33_00325 | P31049 | - | 55312 - 56499 | 46208.8 |
Pathways
1 pathway
No pathways found
No metabolic pathways have been associated with this bacterium yet.