Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Peptostreptococcales
Family
Peptostreptococcaceae
Genus
Clostridioides
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Peptostreptococcales |
| Family | Peptostreptococcaceae |
| Genus | Clostridioides |
| Species | Clostridioides difficile |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 1 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Chains - Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Chemoorganotroph |
| Pathogenicity | Human |
Genome Summary
Clostridioides difficile str. RA09_70
Accession NumberJPPA00000000.1
Gene Summary
Adenine Count
1519866 bp
Thymine Count
1506247 bp
Guanine Count
608909 bp
Cytosine Count
597184 bp
Genome Length
4232226 bp
Protein-coding Genes
3643 genes
Non-Coding Genes
111 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hemolysin | IM33_05840 | Q57017 | + | 1186247 - 1187500 | 46991.2 |
| membrane protein | IM33_05845 | A0A1W5X0D5 | + | 1187648 - 1188700 | 39402.8 |
| peptidase t | IM33_05850 | A0Q3I1 | + | 1188789 - 1190015 | 45628.2 |
| cell wall-binding protein | IM33_05855 | Q02113 | + | 1190222 - 1191274 | 37476.4 |
| phosphodiesterase | IM33_05860 | P67097 | - | 1191510 - 1192079 | 21094.4 |
| inorganic polyphosphate kinase | IM33_05865 | B0S255 | - | 1192104 - 1192904 | 30107.2 |
| abc transporter atp-binding protein | IM33_05870 | Not Available | + | 1193039 - 1193899 | 32954.0 |
| abc transporter permease | IM33_05875 | Not Available | + | 1193899 - 1194585 | 26422.2 |
| hypothetical protein | IM33_05880 | Not Available | + | 1194637 - 1195179 | 20967.2 |
| ebsc protein | IM33_05885 | P71000 | + | 1195267 - 1195734 | 17098.5 |
Pathways
1 pathway
No pathways found
No metabolic pathways have been associated with this bacterium yet.