Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Peptostreptococcales
Family
Peptostreptococcaceae
Genus
Clostridioides
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Peptostreptococcales |
| Family | Peptostreptococcaceae |
| Genus | Clostridioides |
| Species | Clostridioides difficile |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 1 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Chains - Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Chemoorganotroph |
| Pathogenicity | Human |
Genome Summary
Clostridioides difficile str. RA09_70
Accession NumberJPPA00000000.1
Gene Summary
Adenine Count
1519866 bp
Thymine Count
1506247 bp
Guanine Count
608909 bp
Cytosine Count
597184 bp
Genome Length
4232226 bp
Protein-coding Genes
3643 genes
Non-Coding Genes
111 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| mannosyl-glycoprotein endo-beta-n-acetylglucosamidase | IM33_05785 | Not Available | + | 1165136 - 1166110 | 37391.9 |
| n-acetylmuramoyl-l-alanine amidase | IM33_05790 | P54525 | + | 1166349 - 1167250 | 32357.5 |
| n-acetylmuramoyl-l-alanine amidase | IM33_05800 | Q5HNS0 | + | 1167859 - 1168754 | 32176.5 |
| hypothetical protein | IM33_05805 | Not Available | + | 1168998 - 1170911 | 75008.1 |
| helicase | IM33_05810 | Not Available | + | 1170904 - 1173123 | 86195.7 |
| hypothetical protein | IM33_05815 | Not Available | + | 1173234 - 1174064 | 33396.6 |
| atp-dependent helicase | IM33_05820 | Q18AP0 | + | 1174054 - 1177521 | 133471.0 |
| atp-dependent helicase | IM33_05825 | Q18AN9 | + | 1177521 - 1181348 | 147569.0 |
| exonuclease | IM33_05830 | P23479 | + | 1181391 - 1182602 | 45843.9 |
| nuclease sbccd subunit c | IM33_05835 | Q97FK1 | + | 1182589 - 1186116 | 136447.0 |
Pathways
1 pathway
No pathways found
No metabolic pathways have been associated with this bacterium yet.