Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Peptostreptococcales
Family
Peptostreptococcaceae
Genus
Clostridioides
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Peptostreptococcales |
| Family | Peptostreptococcaceae |
| Genus | Clostridioides |
| Species | Clostridioides difficile |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 1 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Chains - Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Chemoorganotroph |
| Pathogenicity | Human |
Genome Summary
Clostridioides difficile str. RA09_70
Accession NumberJPPA00000000.1
Gene Summary
Adenine Count
1519866 bp
Thymine Count
1506247 bp
Guanine Count
608909 bp
Cytosine Count
597184 bp
Genome Length
4232226 bp
Protein-coding Genes
3643 genes
Non-Coding Genes
111 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| spermidine/putrescine abc transporter atp-binding protein | IM33_05735 | Q18AM3 | + | 1152549 - 1153592 | 39729.2 |
| abc transporter permease | IM33_05740 | P45170 | + | 1153594 - 1154430 | 30788.9 |
| spermidine/putrescine abc transporter permease | IM33_05745 | P45169 | + | 1154535 - 1155209 | 24753.3 |
| spermidine/putrescine abc transporter substrate-binding protein | IM33_05750 | P0AFK9 | + | 1155209 - 1156261 | 39893.1 |
| diguanylate cyclase | IM33_05755 | Not Available | + | 1156829 - 1157677 | 32769.6 |
| cell wall anchor protein | IM33_05760 | O31487 | + | 1157667 - 1159331 | 64340.2 |
| glycosyl transferase family 2 | IM33_05765 | P96587 | + | 1159380 - 1160636 | 48777.0 |
| cell wall anchor protein | IM33_05770 | O31488 | + | 1160658 - 1162739 | 79222.8 |
| hydrolase | IM33_05775 | Not Available | + | 1162776 - 1163861 | 42308.4 |
| udp-n-acetylglucosamine 2-epimerase | IM33_05780 | P39131 | + | 1163920 - 1165044 | 42462.5 |
Pathways
1 pathway
No pathways found
No metabolic pathways have been associated with this bacterium yet.