Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Peptostreptococcales
Family
Peptostreptococcaceae
Genus
Clostridioides
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Peptostreptococcales |
| Family | Peptostreptococcaceae |
| Genus | Clostridioides |
| Species | Clostridioides difficile |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 1 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Chains - Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Chemoorganotroph |
| Pathogenicity | Human |
Genome Summary
Clostridioides difficile str. RA09_70
Accession NumberJPPA00000000.1
Gene Summary
Adenine Count
1519866 bp
Thymine Count
1506247 bp
Guanine Count
608909 bp
Cytosine Count
597184 bp
Genome Length
4232226 bp
Protein-coding Genes
3643 genes
Non-Coding Genes
111 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| merr family transcriptional regulator | IM33_05685 | Not Available | - | 1140424 - 1141254 | 32574.8 |
| multidrug abc transporter atp-binding protein | IM33_05690 | P9WQJ1 | + | 1141327 - 1143054 | 63969.3 |
| abc transporter | IM33_05695 | Not Available | + | 1143090 - 1144952 | 68852.9 |
| lysr family transcriptional regulator | IM33_05700 | Not Available | - | 1145274 - 1146161 | 33616.1 |
| hypothetical protein | IM33_05705 | A1AEA8 | + | 1146268 - 1146855 | 21511.2 |
| molecular chaperone | IM33_05710 | Not Available | + | 1147266 - 1147955 | 26850.7 |
| membrane protein | IM33_05715 | Not Available | + | 1148057 - 1148731 | 24521.3 |
| spore coat protein | IM33_05720 | Not Available | + | 1148748 - 1150460 | 63058.5 |
| membrane protein | IM33_05725 | Q57256 | + | 1150853 - 1151542 | 24592.4 |
| cro/cl family transcriptional regulator | IM33_05730 | Not Available | + | 1151991 - 1152530 | 20771.7 |
Pathways
1 pathway
No pathways found
No metabolic pathways have been associated with this bacterium yet.