Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Peptostreptococcales
Family
Peptostreptococcaceae
Genus
Clostridioides
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Peptostreptococcales |
| Family | Peptostreptococcaceae |
| Genus | Clostridioides |
| Species | Clostridioides difficile |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 1 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Chains - Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Chemoorganotroph |
| Pathogenicity | Human |
Genome Summary
Clostridioides difficile str. RA09_70
Accession NumberJPPA00000000.1
Gene Summary
Adenine Count
1519866 bp
Thymine Count
1506247 bp
Guanine Count
608909 bp
Cytosine Count
597184 bp
Genome Length
4232226 bp
Protein-coding Genes
3643 genes
Non-Coding Genes
111 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | IM33_05625 | Not Available | + | 1132090 - 1133820 | 62482.9 |
| hypothetical protein | IM33_05630 | Not Available | + | 1133834 - 1134127 | 11078.2 |
| hypothetical protein | IM33_05635 | Not Available | + | 1134124 - 1134306 | 6925.36 |
| hypothetical protein | IM33_05645 | Not Available | + | 1135579 - 1135878 | 11413.7 |
| membrane protein | IM33_05655 | Not Available | + | 1136048 - 1136278 | 8740.72 |
| holin | IM33_05660 | Not Available | + | 1136291 - 1136548 | 9354.8 |
| sugar abc transporter atpase | IM33_05665 | Not Available | + | 1136808 - 1137671 | 34208.4 |
| endolysin | IM33_05670 | Not Available | + | 1137750 - 1138562 | 30188.4 |
| penicillin-binding protein | IM33_05675 | Not Available | + | 1138656 - 1140244 | 59954.7 |
| merr family transcriptional regulator | IM33_05680 | Not Available | - | 1140245 - 1140339 | 3735.52 |
Pathways
1 pathway
No pathways found
No metabolic pathways have been associated with this bacterium yet.