Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Peptostreptococcales
Family
Peptostreptococcaceae
Genus
Clostridioides
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Peptostreptococcales |
| Family | Peptostreptococcaceae |
| Genus | Clostridioides |
| Species | Clostridioides difficile |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 1 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Chains - Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Chemoorganotroph |
| Pathogenicity | Human |
Genome Summary
Clostridioides difficile str. RA09_70
Accession NumberJPPA00000000.1
Gene Summary
Adenine Count
1519866 bp
Thymine Count
1506247 bp
Guanine Count
608909 bp
Cytosine Count
597184 bp
Genome Length
4232226 bp
Protein-coding Genes
3643 genes
Non-Coding Genes
111 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| cysteinyl-trna synthetase | IM33_05555 | Q18CD5 | + | 1122512 - 1123909 | 53907.8 |
| mini-ribonuclease 3 | IM33_05560 | Q890M5 | + | 1123894 - 1124307 | 16059.5 |
| thymidylate synthase | IM33_05575 | Q5D189 | + | 1125233 - 1126063 | 32031.2 |
| dihydrofolate reductase | IM33_05580 | Q5V600 | + | 1126076 - 1126570 | 19135.1 |
| hypothetical protein | IM33_05585 | J8G6Z1 | + | 1126597 - 1127973 | 52517.7 |
| thiamine biosynthesis protein thic | IM33_05590 | A7I162 | + | 1127949 - 1129049 | 40877.9 |
| rna methyltransferase | IM33_05600 | Q06753 | + | 1129631 - 1130368 | 26960.8 |
| ribonuclease | IM33_05605 | P37574 | + | 1130371 - 1130898 | 20951.3 |
| rna polymerase factor sigma-70 | IM33_05610 | P02964 | + | 1130963 - 1131610 | 24894.0 |
| tail protein | IM33_05620 | Not Available | + | 1131767 - 1132074 | 11396.4 |
Pathways
1 pathway
No pathways found
No metabolic pathways have been associated with this bacterium yet.