Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Peptostreptococcales
Family
Peptostreptococcaceae
Genus
Clostridioides
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Peptostreptococcales |
| Family | Peptostreptococcaceae |
| Genus | Clostridioides |
| Species | Clostridioides difficile |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 1 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Chains - Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Chemoorganotroph |
| Pathogenicity | Human |
Genome Summary
Clostridioides difficile str. RA09_70
Accession NumberJPPA00000000.1
Gene Summary
Adenine Count
1519866 bp
Thymine Count
1506247 bp
Guanine Count
608909 bp
Cytosine Count
597184 bp
Genome Length
4232226 bp
Protein-coding Genes
3643 genes
Non-Coding Genes
111 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| pts galactitol transporter subunit iib | IM33_05500 | Not Available | + | 1110795 - 1111097 | 10777.5 |
| pts system galactitol-specific transporter subunit iic | IM33_05505 | Not Available | + | 1111174 - 1112529 | 47643.6 |
| hypothetical protein | IM33_05510 | Not Available | + | 1112559 - 1113032 | 19048.4 |
| ribulose 5-phosphate epimerase | IM33_05515 | P0DTQ0 | + | 1113200 - 1113850 | 23382.0 |
| lipoate--protein ligase | IM33_05520 | O07608 | + | 1114028 - 1114960 | 36706.9 |
| 2-c-methyl-d-erythritol 4-phosphate cytidylyltransferase | IM33_05525 | Q18CD1 | + | 1115236 - 1115949 | 27301.8 |
| 2-c-methyl-d-erythritol 2,4-cyclodiphosphate synthase | IM33_05530 | Q18CD3 | + | 1115946 - 1116431 | 17464.1 |
| prolyl-trna synthetase | IM33_05535 | Q18CD2 | + | 1116798 - 1118513 | 64412.2 |
| proline--trna ligase | IM33_05540 | Q18CD7 | + | 1118635 - 1120080 | 55120.9 |
| glutamyl-trna synthetase | IM33_05545 | Q18CD6 | + | 1120519 - 1122000 | 56479.7 |
Pathways
1 pathway
No pathways found
No metabolic pathways have been associated with this bacterium yet.