Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Peptostreptococcales
Family
Peptostreptococcaceae
Genus
Clostridioides
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Peptostreptococcales |
| Family | Peptostreptococcaceae |
| Genus | Clostridioides |
| Species | Clostridioides difficile |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 1 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Chains - Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Chemoorganotroph |
| Pathogenicity | Human |
Genome Summary
Clostridioides difficile str. RA09_70
Accession NumberJPPA00000000.1
Gene Summary
Adenine Count
1519866 bp
Thymine Count
1506247 bp
Guanine Count
608909 bp
Cytosine Count
597184 bp
Genome Length
4232226 bp
Protein-coding Genes
3643 genes
Non-Coding Genes
111 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| peptidase m20 | IM33_00220 | Q8H3C9 | - | 29931 - 31151 | 45349.5 |
| atpase aaa | IM33_00225 | Not Available | - | 31521 - 33533 | 77185.1 |
| cyclic nucleotide-binding protein | IM33_00230 | Not Available | + | 33988 - 34638 | 25725.1 |
| multidrug transporter mate | IM33_00235 | Q9WZS2 | - | 34771 - 36147 | 49840.5 |
| thiamine abc transporter substrate-binding protein | IM33_00240 | Not Available | - | 36163 - 38076 | 73626.0 |
| rex family transcriptional regulator | IM33_00245 | Q18CR5 | + | 38212 - 38844 | 23305.3 |
| formylmethanofuran dehydrogenase | IM33_00250 | Not Available | + | 38992 - 39522 | 20392.4 |
| hypothetical protein | IM33_00260 | Not Available | + | 40417 - 40596 | 6786.59 |
| hypothetical protein | IM33_00265 | Q971H1 | + | 40815 - 42059 | 48030.0 |
| hypothetical protein | IM33_00270 | Not Available | + | 42049 - 43068 | 39327.7 |
Pathways
1 pathway
No pathways found
No metabolic pathways have been associated with this bacterium yet.