Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Peptostreptococcales
Family
Peptostreptococcaceae
Genus
Clostridioides
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Peptostreptococcales |
| Family | Peptostreptococcaceae |
| Genus | Clostridioides |
| Species | Clostridioides difficile |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 1 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Chains - Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Chemoorganotroph |
| Pathogenicity | Human |
Genome Summary
Clostridioides difficile
Accession NumberCAAJMV000000000.1
Gene Summary
Adenine Count
1521917 bp
Thymine Count
1576850 bp
Guanine Count
584417 bp
Cytosine Count
633911 bp
Genome Length
4317273 bp
Protein-coding Genes
3615 genes
Non-Coding Genes
410 genes
# of Chromosomes/Plasmids
37
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| sporulation membrane protein spoiiij | SAMEA747647_00524 | Not Available | + | 549400 - 550107 | 26534.3 |
| spoiiij-associated rna/ssdna-binding protein jag | SAMEA747647_00525 | Not Available | + | 550076 - 550705 | 23941.0 |
| trna modification gtpase trme | SAMEA747647_00526 | Not Available | + | 550817 - 552196 | 51180.5 |
| trna uridine 5-carboxymethylaminomethyl modification protein gida | SAMEA747647_00527 | Not Available | + | 552291 - 554186 | 70749.5 |
| 16s rrna methyltransferase gidb | SAMEA747647_00528 | Not Available | + | 554179 - 554898 | 27057.0 |
| stage 0 sporulation protein,dna-binding protein spo0j-like | SAMEA747647_00529 | Not Available | + | 555061 - 555846 | 29843.4 |
| sporulation initiation inhibitor | SAMEA747647_00530 | Not Available | + | 555981 - 556754 | 28472.3 |
| stage 0 sporulation protein j, site-specific dna-binding protein | SAMEA747647_00531 | Not Available | + | 556756 - 557619 | 32841.7 |
| cysteine desulfurase | SAMEA747647_00532 | Not Available | + | 557652 - 558794 | 42094.5 |
| spore germination protein-like protein | SAMEA747647_00533 | Not Available | - | 558927 - 559502 | 21202.9 |
Pathways
1 pathway
No pathways found
No metabolic pathways have been associated with this bacterium yet.