Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Peptostreptococcales
Family
Peptostreptococcaceae
Genus
Clostridioides
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Peptostreptococcales |
| Family | Peptostreptococcaceae |
| Genus | Clostridioides |
| Species | Clostridioides difficile |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 1 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Chains - Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Chemoorganotroph |
| Pathogenicity | Human |
Genome Summary
Clostridioides difficile
Accession NumberCAAJMV000000000.1
Gene Summary
Adenine Count
1521917 bp
Thymine Count
1576850 bp
Guanine Count
584417 bp
Cytosine Count
633911 bp
Genome Length
4317273 bp
Protein-coding Genes
3615 genes
Non-Coding Genes
410 genes
# of Chromosomes/Plasmids
37
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| membrane protein | SAMEA747647_00412 | Not Available | - | 431455 - 432141 | 23415.5 |
| oligonucleotide binding regulator | SAMEA747647_00413 | Not Available | - | 432190 - 432723 | 20464.4 |
| cyclase | SAMEA747647_00414 | Not Available | - | 432767 - 433399 | 24235.8 |
| adp ribosyltransferase | SAMEA747647_00415 | Not Available | - | 433489 - 434568 | 42071.8 |
| peptidase, m20a family | SAMEA747647_00416 | Not Available | - | 434701 - 436047 | 49854.4 |
| pyridoxal phosphate-dependent transferase | SAMEA747647_00417 | Not Available | - | 436116 - 437396 | 47708.3 |
| rna-binding protein hfq | SAMEA747647_00418 | Not Available | - | 437523 - 437783 | 9903.9 |
| trna delta(2)-isopentenylpyrophosphate transferase | SAMEA747647_00419 | Not Available | - | 437897 - 438832 | 36563.3 |
| dna mismatch repair protein | SAMEA747647_00420 | Not Available | - | 438870 - 440837 | 74634.7 |
| dna mismatch repair protein muts | SAMEA747647_00421 | Not Available | - | 440848 - 443691 | 108568.0 |
Pathways
1 pathway
No pathways found
No metabolic pathways have been associated with this bacterium yet.