Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Peptostreptococcales
Family
Peptostreptococcaceae
Genus
Clostridioides
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Peptostreptococcales |
| Family | Peptostreptococcaceae |
| Genus | Clostridioides |
| Species | Clostridioides difficile |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 1 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Chains - Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Chemoorganotroph |
| Pathogenicity | Human |
Genome Summary
Clostridioides difficile
Accession NumberCAAJMV000000000.1
Gene Summary
Adenine Count
1521917 bp
Thymine Count
1576850 bp
Guanine Count
584417 bp
Cytosine Count
633911 bp
Genome Length
4317273 bp
Protein-coding Genes
3615 genes
Non-Coding Genes
410 genes
# of Chromosomes/Plasmids
37
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| riboflavin biosynthesis bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase /5-amino-6-(5-phosphoribosylamino)uracil reductase | SAMEA747647_01579 | Not Available | + | 1584454 - 1585566 | 41190.9 |
| riboflavin synthase subunit alpha | SAMEA747647_01580 | Not Available | + | 1585600 - 1586265 | 24034.0 |
| riboflavin biosynthesis 3,4-dihydroxy-2-butanone 4-phosphate synthase/gtp cyclohydrolase-2 | SAMEA747647_01581 | Not Available | + | 1586288 - 1587481 | 44880.3 |
| 6,7-dimethyl-8-ribityllumazine synthase | SAMEA747647_01582 | Not Available | + | 1587586 - 1588047 | 16662.3 |
| sodium:alanine symporter | SAMEA747647_01583 | Not Available | - | 1588266 - 1589717 | 52183.5 |
| symporter protein | SAMEA747647_01584 | Not Available | + | 1590187 - 1591452 | 45389.9 |
| uncharacterised protein | SAMEA747647_01585 | Not Available | + | 1591491 - 1591946 | 17576.8 |
| dinitrogenase iron-molybdenum cofactor | SAMEA747647_01586 | Not Available | - | 1592091 - 1592462 | 12924.4 |
| arsr family transcriptional regulator | SAMEA747647_01587 | Not Available | - | 1592465 - 1592833 | 13916.1 |
| thioredoxin-disulfide reductase | SAMEA747647_01588 | Not Available | - | 1593103 - 1593981 | 32269.5 |
Pathways
1 pathway
No pathways found
No metabolic pathways have been associated with this bacterium yet.